/usr/local/phylogeny/phyml/bin/phyml -i input_files/20110203_152601.txt -d codon -b 0 -f e --mechanistic "/usr/local/phylogeny/phyml/dat/Wmatrix_with_EI-11_JTT EI-11" -c 1 --mechanistic_opt 01000 -o lr --mechanistic_params \"1.0 0.0 0.0 0.0 1.0 1.0 1.0 1.0 1.0 0.25 0.25 0.25\"


. The file 'input_files/20110203_152601.txt' does not exist.

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