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#author("2020-12-03T13:40:56+09:00","default:miyazawa","miyazawa")
#author("2020-12-03T13:41:31+09:00","default:miyazawa","miyazawa")
#norelated
* [[MIYAZAWA, Sanzo (宮澤 三造)>MiyazawaWiki:Profile]] [[ >Miyazawa:profile]] [#yf6a065a]
//([[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]] | [[miyazawa@sanzo.org>mailto:miyazawa@sanzo.org]])[#qb249ac2]
- [[ORCID: 0000-0002-5063-3661 >https://orcid.org/0000-0002-5063-3661]]
- My profile in [[Google Scholar >http://scholar.google.co.jp/citations?user=6TZe1KgAAAAJ&hl=en]] | [[Microsoft Academic>http://academic.research.microsoft.com/Author/2263855/sanzo-miyazawa]]
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- E-mail: [[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]] | [[miyazawa@sanzo.org>mailto:miyazawa@sanzo.org]]
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[[.>Miyazawa:LINKS/wiki/]]
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//[[.>Miyazawa:LINKS/wiki/]]
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** Web service [#w4087a67]
//(Inquiry: [[sanzo.miyazawa@gmail.com>mailto:sanzo.miyazawa@gmail.com]]) [#u922d7e2]
- Multiple sequence alignment
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[[ClustalW2>http://www.clustal.org/]]: [[A version modified to analyze coding sequences >Miyazawa:pub/clustalw2/index.html]]
-- Download: [[Patch file to the clustalw2 package including data files>Miyazawa:pub/Download/clustalw2_patches/]] | [[Clustalw2 web service>Miyazawa:pub/Download/clustalw2_webservice]]
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- ML method to infer a phylogenetic tree and coevolutional site pairs
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[[Phyml>http://code.google.com/p/phyml/]]: [[A version modified to analyze coding sequences >Miyazawa:pub/phyml/index.php]]
-- Download: [[Patch file to the phyml package including data files>Miyazawa:pub/Download/phyml_patches/]] | [[Phyml web service>Miyazawa:pub/Download/phyml_webservice]]
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--References for [[the original PHYML>http://code.google.com/p/phyml/]] by S. Guindon AND O. Gascuel:
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Systematic Biology 52(5):696-704, 2003.
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--References for the modified version:
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[[BMC Evol. Biol. 13, 257, 2013>http://dx.doi.org/10.1186/1471-2148-13-257]]
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[[PLoS One 8, e54252/pp. 1-20, 2013>http://dx.doi.org/10.1371/journal.pone.0054252]]
| [[tools used for contact prediction>Miyazawa:pub/Download/tools_for_contact_prediction/tools.tar.bz2]]
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[[PLoS One 8, e28892/pp. 1-20, 2011>http://dx.doi.org/10.1371/journal.pone.0028892]]
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[[PLoS One 8, e17244/pp. 1-23, 2011>http://dx.doi.org/10.1371/journal.pone.0017244]]
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- [[SQL search on PDB>Miyazawa:pub/pdbj/index_e.html]]
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